Algorithms

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  LBI
  Approx.Pali.

also see
Algorithms
 Strings
Numerous algorithmic problems arise in Bioinformatics over and above [alignment], [evolutionary] trees etc..
 
The longest biased interval (LBI) problem is to find long intervals in a sequence that are of biological interest because they have significantly biased base-composition.
 
Approximate palindromes in DNA may code for miRNAs or have other biological functions.
 
Some "classic" Computer Science algorithms and data structures are also useful in Bioinformatics, for example,
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